Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ube2j1 (ubiquitin-conjugating enzyme E2, J1) Rattus norvegicus
Analyze
Symbol: Ube2j1
Name: ubiquitin-conjugating enzyme E2, J1
CRRD ID: 1305067
Description: Predicted to have ubiquitin conjugating enzyme activity and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including cellular protein metabolic process; negative regulation of retrograde protein transport, ER to cytosol; and regulation of tumor necrosis factor production. Predicted to localize to nucleus. Orthologous to human UBE2J1 (ubiquitin conjugating enzyme E2 J1); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; Parkinson's disease pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC297961; ubiquitin-conjugating enzyme E2 J1; ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
Orthologs:
Homo sapiens (human) : UBE2J1 (ubiquitin conjugating enzyme E2 J1)  HGNC  Alliance
Mus musculus (house mouse) : Ube2j1 (ubiquitin-conjugating enzyme E2J 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ube2j1 (ubiquitin conjugating enzyme E2 J1)
Pan paniscus (bonobo/pygmy chimpanzee) : UBE2J1 (ubiquitin conjugating enzyme E2 J1)
Canis lupus familiaris (dog) : UBE2J1 (ubiquitin conjugating enzyme E2 J1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ube2j1 (ubiquitin conjugating enzyme E2 J1)
Sus scrofa (pig) : UBE2J1 (ubiquitin conjugating enzyme E2 J1)
Chlorocebus sabaeus (African green monkey) : UBE2J1 (ubiquitin conjugating enzyme E2 J1)
Heterocephalus glaber (naked mole-rat) : Ube2j1 (ubiquitin conjugating enzyme E2 J1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0548,274,387 - 48,292,699 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl548,274,477 - 48,290,658 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0552,858,636 - 52,875,428 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4549,317,881 - 49,337,258 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1549,318,023 - 49,337,593 (+)NCBI
Celera546,180,371 - 46,196,728 (+)NCBICelera
Cytogenetic Map5q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ube2j1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305067
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.