Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ro60 (Ro60, Y RNA binding protein) Rattus norvegicus
Analyze
Symbol: Ro60
Name: Ro60, Y RNA binding protein
Description: Predicted to have U2 snRNA binding activity. Predicted to be involved in several processes, including cellular response to interferon-alpha; cilium assembly; and smoothened signaling pathway. Predicted to localize to the cytosol; nucleoplasm; and ribonucleoprotein complex. Orthologous to human RO60 (Ro60, Y RNA binding protein); PARTICIPATES IN systemic lupus erythematosus pathway; INTERACTS WITH 17alpha-ethynylestradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 60 kDa SS-A/Ro ribonucleoprotein; LOC304833; Sjogren syndrome antigen A2; Ssa2; TROVE domain family, member 2; Trove2
Orthologs:
Homo sapiens (human) : RO60 (Ro60, Y RNA binding protein)  HGNC  Alliance
Mus musculus (house mouse) : Ro60 (Ro60, Y RNA binding protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ro60 (Ro60, Y RNA binding protein)
Pan paniscus (bonobo/pygmy chimpanzee) : RO60 (Ro60, Y RNA binding protein)
Canis lupus familiaris (dog) : RO60 (Ro60, Y RNA binding protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ro60 (Ro60, Y RNA binding protein)
Sus scrofa (pig) : RO60 (Ro60, Y RNA binding protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01360,546,892 - 60,567,882 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1360,546,912 - 60,567,882 (-)Ensembl
Rnor_5.01365,535,453 - 65,556,443 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41357,584,656 - 57,605,648 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11357,600,708 - 57,614,506 (-)NCBI
Celera1355,587,205 - 55,608,219 (-)NCBICelera
Cytogenetic Map13q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ro60
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305083
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.