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Gene: Csmd1 (CUB and Sushi multiple domains 1) Rattus norvegicus
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Symbol: Csmd1
Name: CUB and Sushi multiple domains 1
Description: Predicted to be involved in glucose homeostasis and startle response. Predicted to localize to the integral component of membrane. Orthologous to human CSMD1 (CUB and Sushi multiple domains 1); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; aflatoxin B1.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CUB and sushi domain-containing protein 1; LOC364635; Mdcr1; multiple domain complement regulator 1
Orthologs:
Homo sapiens (human) : CSMD1 (CUB and Sushi multiple domains 1)  HGNC  Alliance
Mus musculus (house mouse) : Csmd1 (CUB and Sushi multiple domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Csmd1 (CUB and Sushi multiple domains 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CSMD1 (CUB and Sushi multiple domains 1)
Canis lupus familiaris (dog) : CSMD1 (CUB and Sushi multiple domains 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Csmd1 (CUB and Sushi multiple domains 1)
Sus scrofa (pig) : CSMD1 (CUB and Sushi multiple domains 1)
Chlorocebus sabaeus (green monkey) : CSMD1 (CUB and Sushi multiple domains 1)
Heterocephalus glaber (naked mole-rat) : Csmd1 (CUB and Sushi multiple domains 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01677,152,823 - 78,850,222 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1678,539,489 - 78,850,222 (+)Ensembl
Rnor_5.01676,755,073 - 77,603,096 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01678,123,916 - 78,434,380 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01677,824,236 - 78,025,776 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41677,485,217 - 78,605,037 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11677,795,191 - 77,816,111 (+)NCBI
Celera1670,047,120 - 71,640,895 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Csmd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305103
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.