Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Wdr45b (WD repeat domain 45B) Rattus norvegicus
Analyze
Symbol: Wdr45b
Name: WD repeat domain 45B
Description: Predicted to have TSC1-TSC2 complex binding activity; phosphatidylinositol-3,5-bisphosphate binding activity; and phosphatidylinositol-3-phosphate binding activity. Predicted to be involved in several processes, including autophagy of mitochondrion; autophagy of nucleus; and protein localization to phagophore assembly site. Predicted to localize to several cellular components, including extrinsic component of membrane; lysosome; and phagophore assembly site membrane. Orthologous to human WDR45B (WD repeat domain 45B); INTERACTS WITH bisphenol A; Soman; thioacetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: D16Bwg0193e; DNA segment, Chr 16, Brigham & Womens Genetics 0193 expressed; LOC360682; RGD1305141; similar to RIKEN cDNA 0610008N23; WD repeat domain phosphoinositide-interacting protein 3; Wdr45 like; WDR45L; WIPI-3
Orthologs:
Homo sapiens (human) : WDR45B (WD repeat domain 45B)  HGNC  Alliance
Mus musculus (house mouse) : Wdr45b (WD repeat domain 45B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Wdr45b (WD repeat domain 45B)
Pan paniscus (bonobo/pygmy chimpanzee) : WDR45B (WD repeat domain 45B)
Canis lupus familiaris (dog) : WDR45B (WD repeat domain 45B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Wdr45b (WD repeat domain 45B)
Sus scrofa (pig) : WDR45B (WD repeat domain 45B)
Chlorocebus sabaeus (African green monkey) : WDR45B (WD repeat domain 45B)
Heterocephalus glaber (naked mole-rat) : Wdr45b (WD repeat domain 45B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010110,523,843 - 110,555,769 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10110,525,749 - 110,555,761 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010110,109,737 - 110,141,339 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410110,558,417 - 110,588,534 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110110,573,975 - 110,603,038 (-)NCBI
Celera10105,135,955 - 105,167,805 (-)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Wdr45b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305141
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.