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Gene: Pbxip1 (PBX homeobox interacting protein 1) Rattus norvegicus
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Symbol: Pbxip1
Name: PBX homeobox interacting protein 1
CRRD ID: 1305180
Description: Predicted to have transcription corepressor activity. Predicted to be involved in regulation of Rho guanyl-nucleotide exchange factor activity. Predicted to localize to membrane. Orthologous to human PBXIP1 (PBX homeobox interacting protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; amphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hematopoietic PBX-interacting protein; LOC310644; pre-B-cell leukemia homeobox interacting protein 1; pre-B-cell leukemia transcription factor interacting protein 1; pre-B-cell leukemia transcription factor-interacting protein 1
Orthologs:
Homo sapiens (human) : PBXIP1 (PBX homeobox interacting protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Pbxip1 (pre B cell leukemia transcription factor interacting protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pbxip1 (PBX homeobox interacting protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PBXIP1 (PBX homeobox interacting protein 1)
Canis lupus familiaris (dog) : PBXIP1 (PBX homeobox interacting protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pbxip1 (PBX homeobox interacting protein 1)
Chlorocebus sabaeus (African green monkey) : PBXIP1 (PBX homeobox interacting protein 1)
Heterocephalus glaber (naked mole-rat) : Pbxip1 (PBX homeobox interacting protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02188,763,887 - 188,776,445 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2188,766,535 - 188,776,439 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02208,178,170 - 208,190,545 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42181,637,864 - 181,647,769 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12181,588,004 - 181,597,102 (+)NCBI
Celera2168,799,890 - 168,809,795 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pbxip1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305180
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.