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Gene: Phf2 (PHD finger protein 2) Rattus norvegicus
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Symbol: Phf2
Name: PHD finger protein 2
Description: Predicted to contribute to transcription coactivator activity. Predicted to be involved in histone H3-K9 demethylation and negative regulation of chromatin silencing at rDNA. Predicted to localize to the kinetochore and nucleolus. Orthologous to human PHF2 (PHD finger protein 2); PARTICIPATES IN histone modification pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,3-dinitrobenzene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC306814; lysine-specific demethylase PHF2
Orthologs:
Homo sapiens (human) : PHF2 (PHD finger protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Phf2 (PHD finger protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phf2 (PHD finger protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PHF2 (PHD finger protein 2)
Canis lupus familiaris (dog) : PHF2 (PHD finger protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phf2 (PHD finger protein 2)
Sus scrofa (pig) : PHF2 (PHD finger protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01716,240,458 - 16,274,626 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01718,301,167 - 18,332,954 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41721,806,034 - 21,842,190 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11721,805,297 - 21,840,348 (+)NCBI
Celera1715,545,661 - 15,578,193 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Phf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305228
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.