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Gene: Usp42 (ubiquitin specific peptidase 42) Rattus norvegicus
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Symbol: Usp42
Name: ubiquitin specific peptidase 42
Description: Predicted to have cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. Predicted to be involved in protein deubiquitination and regulation of apoptotic process. Orthologous to human USP42 (ubiquitin specific peptidase 42); INTERACTS WITH 2,4-dinitrotoluene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: deubiquitinating enzyme 42; LOC288482; ubiquitin carboxyl-terminal hydrolase 42; ubiquitin specific protease 42; ubiquitin thioesterase 42; ubiquitin thiolesterase 42; ubiquitin-specific-processing protease 42
Orthologs:
Homo sapiens (human) : USP42 (ubiquitin specific peptidase 42)  HGNC  Alliance
Mus musculus (house mouse) : Usp42 (ubiquitin specific peptidase 42)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : USP42 (ubiquitin specific peptidase 42)
Canis lupus familiaris (dog) : USP42 (ubiquitin specific peptidase 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp42 (ubiquitin specific peptidase 42)
Sus scrofa (pig) : USP42 (ubiquitin specific peptidase 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01212,840,131 - 12,878,207 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01214,881,194 - 14,922,553 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41211,151,534 - 11,170,068 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11211,181,461 - 11,196,973 (+)NCBI
Celera1212,619,047 - 12,637,594 (+)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Usp42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305231
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.