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Gene: Pdzrn3 (PDZ domain containing RING finger 3) Rattus norvegicus
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Symbol: Pdzrn3
Name: PDZ domain containing RING finger 3
Description: Predicted to have ubiquitin protein ligase activity. Predicted to be involved in neuromuscular junction development and protein ubiquitination. Predicted to localize to the cytosol; neuromuscular junction; and nucleoplasm. Orthologous to human PDZRN3 (PDZ domain containing ring finger 3); INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: E3 ubiquitin-protein ligase PDZRN3; LOC312607; PDZ domain-containing RING finger protein 3; RING-type E3 ubiquitin transferase PDZRN3; semaphorin cytoplasmic domain-associated protein 3
Orthologs:
Homo sapiens (human) : PDZRN3 (PDZ domain containing ring finger 3)  HGNC  Alliance
Mus musculus (house mouse) : Pdzrn3 (PDZ domain containing RING finger 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdzrn3 (PDZ domain containing ring finger 3)
Pan paniscus (bonobo/pygmy chimpanzee) : PDZRN3 (PDZ domain containing ring finger 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdzrn3 (PDZ domain containing ring finger 3)
Sus scrofa (pig) : PDZRN3 (PDZ domain containing ring finger 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04133,717,139 - 133,951,282 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04198,194,465 - 198,429,457 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44136,044,210 - 136,254,969 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14136,260,810 - 136,311,636 (-)NCBI
Celera4122,607,053 - 122,831,741 (-)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pdzrn3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305250
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.