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Gene: Cwc25 (CWC25 spliceosome-associated protein homolog) Rattus norvegicus
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Symbol: Cwc25
Name: CWC25 spliceosome-associated protein homolog
Description: Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to the U2-type catalytic step 1 spliceosome and nuclear speck. Orthologous to human CWC25 (CWC25 spliceosome associated protein homolog); INTERACTS WITH acrylamide; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Ccdc49; coiled-coil domain containing 49; CWC25 spliceosome-associated protein homolog (S. cerevisiae); LOC360613; pre-mRNA-splicing factor CWC25 homolog; RGD1305258; similar to RIKEN cDNA 1300013D05
Orthologs:
Homo sapiens (human) : CWC25 (CWC25 spliceosome associated protein homolog)  HGNC  Alliance
Mus musculus (house mouse) : Cwc25 (CWC25 spliceosome-associated protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cwc25 (CWC25 spliceosome associated protein homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : CWC25 (CWC25 spliceosome associated protein homolog)
Canis lupus familiaris (dog) : CWC25 (CWC25 spliceosome associated protein homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cwc25 (CWC25 spliceosome associated protein homolog)
Sus scrofa (pig) : CWC25 (CWC25 spliceosome associated protein homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01085,684,898 - 85,709,568 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1085,684,898 - 85,709,568 (-)Ensembl
Rnor_5.01085,475,897 - 85,499,557 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41086,491,167 - 86,515,834 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11086,507,374 - 86,537,704 (-)NCBI
Celera1081,491,290 - 81,515,794 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cwc25
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305258
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.