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Gene: Rlf (RLF zinc finger) Rattus norvegicus
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Symbol: Rlf
Name: RLF zinc finger
Description: Predicted to have DNA binding activity and DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in DNA integration; histone H3-K4 monomethylation; and regulation of nucleobase-containing compound metabolic process. Predicted to localize to nucleus. Orthologous to human RLF (RLF zinc finger); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; amphetamine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC313566; rearranged L-myc fusion; rearranged L-myc fusion sequence; zinc finger protein Rlf
Orthologs:
Homo sapiens (human) : RLF (RLF zinc finger)  HGNC  Alliance
Mus musculus (house mouse) : Rlf (rearranged L-myc fusion sequence)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rlf (RLF zinc finger)
Pan paniscus (bonobo/pygmy chimpanzee) : RLF (RLF zinc finger)
Canis lupus familiaris (dog) : RLF (RLF zinc finger)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rlf (RLF zinc finger)
Sus scrofa (pig) : RLF (RLF zinc finger)
Chlorocebus sabaeus (African green monkey) : RLF (RLF zinc finger)
Heterocephalus glaber (naked mole-rat) : Rlf (RLF zinc finger)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05140,107,144 - 140,162,698 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5140,107,275 - 140,162,642 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05143,899,907 - 143,955,065 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45141,731,587 - 141,788,245 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15141,737,265 - 142,022,045 (-)NCBI
Celera5133,265,727 - 133,321,341 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rlf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305297
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.