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Gene: Arid3a (AT-rich interaction domain 3A) Rattus norvegicus
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Symbol: Arid3a
Name: AT-rich interaction domain 3A
Description: Predicted to have several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II regulatory region sequence-specific DNA binding activity; and protein homodimerization activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to the cytosol; membrane raft; and nucleoplasm. Orthologous to human ARID3A (AT-rich interaction domain 3A); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AT rich interactive domain 3A (Bright like); AT-rich interactive domain-containing protein 3A; dead ringer homolog 1; LOC314616; MGC189073
Orthologs:
Homo sapiens (human) : ARID3A (AT-rich interaction domain 3A)  HGNC  Alliance
Mus musculus (house mouse) : Arid3a (AT rich interactive domain 3A (BRIGHT-like))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arid3a (AT-rich interaction domain 3A)
Pan paniscus (bonobo/pygmy chimpanzee) : ARID3A (AT-rich interaction domain 3A)
Canis lupus familiaris (dog) : ARID3A (AT-rich interaction domain 3A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arid3a (AT-rich interaction domain 3A)
Sus scrofa (pig) : ARID3A (AT-rich interaction domain 3A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0712,573,604 - 12,602,407 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,574,198 - 12,601,674 (-)Ensembl
Rnor_5.0712,745,711 - 12,771,710 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4711,269,055 - 11,290,551 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1711,269,305 - 11,293,860 (-)NCBI
Celera77,930,752 - 7,952,277 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Arid3a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305299
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.