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Gene: Abce1 (ATP binding cassette subfamily E member 1) Rattus norvegicus
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Symbol: Abce1
Name: ATP binding cassette subfamily E member 1
Description: Predicted to have several functions, including ATP binding activity; endoribonuclease inhibitor activity; and ribosomal small subunit binding activity. Predicted to be involved in negative regulation of endoribonuclease activity; ribosomal subunit export from nucleus; and translation. Predicted to localize to the cytosol and mitochondrion. Human ortholog(s) of this gene implicated in human immunodeficiency virus infectious disease. Orthologous to human ABCE1 (ATP binding cassette subfamily E member 1); PARTICIPATES IN translation termination pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP-binding cassette sub-family E member 1; ATP-binding cassette, sub-family E (OABP), member 1; ATP-binding cassette, subfamily E (OABP), member 1; LOC361390; Oabp; Rns4i
Orthologs:
Homo sapiens (human) : ABCE1 (ATP binding cassette subfamily E member 1)  HGNC  Alliance
Mus musculus (house mouse) : Abce1 (ATP-binding cassette, sub-family E (OABP), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Abce1 (ATP binding cassette subfamily E member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ABCE1 (ATP binding cassette subfamily E member 1)
Canis lupus familiaris (dog) : ABCE1 (ATP binding cassette subfamily E member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Abce1 (ATP binding cassette subfamily E member 1)
Sus scrofa (pig) : ABCE1 (ATP binding cassette subfamily E member 1)
Chlorocebus sabaeus (green monkey) : ABCE1 (ATP binding cassette subfamily E member 1)
Heterocephalus glaber (naked mole-rat) : Abce1 (ATP binding cassette subfamily E member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01931,867,960 - 31,892,863 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1931,867,981 - 31,892,863 (+)Ensembl
Rnor_5.01942,771,943 - 42,796,838 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41930,093,741 - 30,118,625 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11930,098,545 - 30,123,448 (+)NCBI
Celera1927,713,656 - 27,738,540 (+)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Abce1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305301
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.