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Gene: Klhl40 (kelch-like family member 40) Rattus norvegicus
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Symbol: Klhl40
Name: kelch-like family member 40
Description: Predicted to be involved in myotube differentiation and regulation of cellular protein metabolic process. Predicted to localize to the A band; Cul3-RING ubiquitin ligase complex; and I band. Human ortholog(s) of this gene implicated in nemaline myopathy 8. Orthologous to human KLHL40 (kelch like family member 40); INTERACTS WITH 3,7-dihydropurine-6-thione; bisphenol A; carbofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Kbtbd5; kelch repeat and BTB (POZ) domain containing 5; kelch repeat and BTB domain-containing protein 5; kelch-like 40; kelch-like 40 (Drosophila); kelch-like protein 40; LOC316088; similar to kelch repeat and BTB (POZ) domain containing 5
Orthologs:
Homo sapiens (human) : KLHL40 (kelch like family member 40)  HGNC  Alliance
Mus musculus (house mouse) : Klhl40 (kelch-like 40)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Klhl40 (kelch like family member 40)
Pan paniscus (bonobo/pygmy chimpanzee) : KLHL40 (kelch like family member 40)
Canis lupus familiaris (dog) : KLHL40 (kelch like family member 40)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Klhl40 (kelch like family member 40)
Sus scrofa (pig) : KLHL40 (kelch like family member 40)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08130,416,265 - 130,421,871 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08129,596,172 - 129,601,706 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48127,153,472 - 127,159,307 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18127,173,602 - 127,178,958 (-)NCBI
Celera8120,575,465 - 120,580,981 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Klhl40
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305368
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.