Gene: Nkx3-1 (NK3 homeobox 1) Rattus norvegicus
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Symbol: Nkx3-1
Name: NK3 homeobox 1
Description: Predicted to have several functions, including MADS box domain binding activity, RNA polymerase II proximal promoter sequence-specific DNA binding activity, and cysteine-type endopeptidase activator activity involved in apoptotic process; predicted to be involved in several processes, including animal organ development, positive regulation of cell communication, and positive regulation of cellular metabolic process; predicted to localize to the nucleus and site of DNA damage; orthologous to human NKX3-1 (NK3 homeobox 1); PARTICIPATES IN forkhead class A signaling pathway; prostate cancer pathway; INTERACTS WITH acrylamide; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox protein Nkx-3.1; LOC305999; MGC124859; NK-3 transcription factor, locus 1; NK-3 transcription factor, locus 1 (Drosophila)
Orthologs:
Homo sapiens (human) : NKX3-1 (NK3 homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Nkx3-1 (NK3 homeobox 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nkx3-1 (NK3 homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NKX3-1 (NK3 homeobox 1)
Canis lupus familiaris (dog) : NKX3-1 (NK3 homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nkx3-1 (NK3 homeobox 1)
Sus scrofa (pig) : NKX3-1 (NK3 homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01551,065,316 - 51,067,908 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01554,796,102 - 54,798,694 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41549,743,313 - 49,745,905 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11549,752,541 - 49,761,067 (+)NCBI
Celera1544,157,589 - 44,160,181 (+)NCBICelera
Cytogenetic Map15p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nkx3-1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305369
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.