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Gene: Jmjd6 (jumonji domain containing 6, arginine demethylase and lysine hydroxylase) Rattus norvegicus
Symbol: Jmjd6
Name: jumonji domain containing 6, arginine demethylase and lysine hydroxylase
CRRD ID: 1305395
Description: Predicted to have several functions, including P-TEFb complex binding activity; demethylase activity; and transcription coactivator activity. Predicted to be involved in several processes, including animal organ development; histone arginine demethylation; and regulation of RNA metabolic process. Predicted to localize to several cellular components, including cytosol; nuclear lumen; and ribonucleoprotein complex. Orthologous to human JMJD6 (jumonji domain containing 6, arginine demethylase and lysine hydroxylase); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: arginine demethylase and lysine hydroxylase; bifunctional arginine demethylase and lysyl-hydroxylase JMJD6; histone arginine demethylase JMJD6; jmjC domain-containing protein 6; jumonji domain containing 6; jumonji domain-containing protein 6; LOC360665; lysyl-hydroxylase JMJD6; peptide-lysine 5-dioxygenase JMJD6; phosphatidylserine receptor; Ptdsr
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.010105,781,752 - 105,787,803 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10105,781,753 - 105,787,803 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010105,440,305 - 105,446,356 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410106,942,942 - 106,948,652 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110106,957,446 - 106,963,156 (-)NCBI
Celera10100,609,595 - 100,615,642 (-)NCBICelera
Cytogenetic Map10q32.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Jmjd6
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305395
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-09-01
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.