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Gene: Jmjd6 (jumonji domain containing 6, arginine demethylase and lysine hydroxylase) Rattus norvegicus
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Symbol: Jmjd6
Name: jumonji domain containing 6, arginine demethylase and lysine hydroxylase
Description: Predicted to have several functions, including P-TEFb complex binding activity; demethylase activity; and protein homodimerization activity. Predicted to be involved in several processes, including animal organ development; cellular protein modification process; and regulation of RNA metabolic process. Predicted to localize to several cellular components, including the cytosol; nucleus; and plasma membrane. Orthologous to human JMJD6 (jumonji domain containing 6, arginine demethylase and lysine hydroxylase); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 3,3',4,4',5-pentachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: arginine demethylase and lysine hydroxylase; bifunctional arginine demethylase and lysyl-hydroxylase JMJD6; histone arginine demethylase JMJD6; jmjC domain-containing protein 6; jumonji domain containing 6; jumonji domain-containing protein 6; LOC360665; lysyl-hydroxylase JMJD6; peptide-lysine 5-dioxygenase JMJD6; phosphatidylserine receptor; Ptdsr
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010105,781,752 - 105,787,803 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010105,440,305 - 105,446,356 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410106,942,942 - 106,948,652 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110106,957,446 - 106,963,156 (-)NCBI
Celera10100,609,595 - 100,615,642 (-)NCBICelera
Cytogenetic Map10q32.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Jmjd6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305395
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.