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Gene: Taf13 (TATA-box binding protein associated factor 13) Rattus norvegicus
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Symbol: Taf13
Name: TATA-box binding protein associated factor 13
Description: Predicted to have DNA binding activity; protein C-terminus binding activity; and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to the nucleolus and transcription factor TFIID complex. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human TAF13 (TATA-box binding protein associated factor 13); PARTICIPATES IN RNA polymerase II transcription initiation pathway; INTERACTS WITH bisphenol A; finasteride; flutamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC310784; TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor; transcription initiation factor TFIID subunit 13
Orthologs:
Homo sapiens (human) : TAF13 (TATA-box binding protein associated factor 13)  HGNC  Alliance
Mus musculus (house mouse) : Taf13 (TATA-box binding protein associated factor 13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Taf13 (TATA-box binding protein associated factor 13)
Pan paniscus (bonobo/pygmy chimpanzee) : TAF13 (TATA-box binding protein associated factor 13)
Canis lupus familiaris (dog) : TAF13 (TATA-box binding protein associated factor 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Taf13 (TATA-box binding protein associated factor 13)
Sus scrofa (pig) : TAF13 (TATA-box binding protein associated factor 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02211,359,623 - 211,370,285 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2211,359,623 - 211,370,284 (+)Ensembl
Rnor_5.02230,830,628 - 230,841,318 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42204,136,548 - 204,147,904 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12204,100,497 - 204,110,659 (+)NCBI
Celera2188,850,690 - 188,861,275 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Taf13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305398
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.