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Gene: Cdh20 (cadherin 20) Rattus norvegicus
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Symbol: Cdh20
Name: cadherin 20
CRRD ID: 1305438
Description: Predicted to have cadherin binding activity and calcium ion binding activity. Predicted to be involved in several processes, including calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; cell morphogenesis; and cell-cell junction organization. Predicted to localize to adherens junction and catenin complex. Orthologous to human CDH20 (cadherin 20); INTERACTS WITH bisphenol A; cadmium dichloride; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Cad20; cadherin-20; LOC363948
Orthologs:
Homo sapiens (human) : CDH20 (cadherin 20)  HGNC  Alliance
Mus musculus (house mouse) : Cdh20 (cadherin 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdh20 (cadherin 20)
Pan paniscus (bonobo/pygmy chimpanzee) : CDH20 (cadherin 20)
Canis lupus familiaris (dog) : CDH20 (cadherin 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdh20 (cadherin 20)
Sus scrofa (pig) : CDH20 (cadherin 20)
Chlorocebus sabaeus (African green monkey) : CDH20 (cadherin 20)
Heterocephalus glaber (naked mole-rat) : Cdh20 (cadherin 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01324,630,298 - 24,914,463 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1324,823,488 - 24,913,884 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01330,018,338 - 30,085,298 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41310,970,187 - 11,038,947 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11310,970,186 - 11,038,946 (+)NCBI
Celera1320,896,704 - 20,961,175 (+)NCBICelera
Cytogenetic Map13p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cdh20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305438
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.