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Gene: Tfcp2l1 (transcription factor CP2-like 1) Rattus norvegicus
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Symbol: Tfcp2l1
Name: transcription factor CP2-like 1
CRRD ID: 1305456
Description: Predicted to have DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including determination of adult lifespan; epithelial cell maturation; and negative regulation of transcription by RNA polymerase II. Predicted to localize to cytoplasm; membrane; and nucleus. Orthologous to human TFCP2L1 (transcription factor CP2 like 1); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC304741; Tcfcp2l1; transcription factor CP2-like protein 1
Orthologs:
Homo sapiens (human) : TFCP2L1 (transcription factor CP2 like 1)  HGNC  Alliance
Mus musculus (house mouse) : Tfcp2l1 (transcription factor CP2-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tfcp2l1 (transcription factor CP2 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TFCP2L1 (transcription factor CP2 like 1)
Canis lupus familiaris (dog) : TFCP2L1 (transcription factor CP2 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tfcp2l1 (transcription factor CP2 like 1)
Sus scrofa (pig) : TFCP2L1 (transcription factor CP2 like 1)
Chlorocebus sabaeus (African green monkey) : TFCP2L1 (transcription factor CP2 like 1)
Heterocephalus glaber (naked mole-rat) : Tfcp2l1 (transcription factor CP2 like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01334,610,689 - 34,671,617 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1334,610,684 - 34,670,124 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01339,741,256 - 39,801,251 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41331,288,228 - 31,401,482 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11331,287,875 - 31,343,809 (+)NCBI
Celera1329,637,385 - 29,697,059 (+)NCBICelera
Cytogenetic Map13q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tfcp2l1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305456
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.