Gene: Sema6a (semaphorin 6A) Rattus norvegicus
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Symbol: Sema6a
Name: semaphorin 6A
Description: Predicted to have identical protein binding activity, signaling receptor binding activity, and transmembrane signaling receptor activity; predicted to be involved in several processes, including cellular response to vascular endothelial growth factor stimulus, generation of neurons, and negative regulation of signal transduction; predicted to localize to the extracellular space and integral component of plasma membrane; orthologous to human SEMA6A (semaphorin 6A); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC361324; sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A; semaphorin 6A-1; semaphorin-6A
Orthologs:
Homo sapiens (human) : SEMA6A (semaphorin 6A)  HGNC  Alliance
Mus musculus (house mouse) : Sema6a (sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema6a (semaphorin 6A)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA6A (semaphorin 6A)
Canis lupus familiaris (dog) : SEMA6A (semaphorin 6A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sema6a (semaphorin 6A)
Sus scrofa (pig) : SEMA6A (semaphorin 6A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01841,330,519 - 41,451,813 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01840,972,328 - 41,092,331 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41841,545,350 - 41,665,721 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11841,582,877 - 41,703,796 (-)NCBI
Celera1838,297,774 - 38,419,108 (-)NCBICelera
Cytogenetic Map18q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sema6a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305493
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.