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Gene: B9d1 (B9 domain containing 1) Rattus norvegicus
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Symbol: B9d1
Name: B9 domain containing 1
Description: Predicted to have hedgehog receptor activity. Predicted to be involved in several processes, including cilium assembly; embryonic digit morphogenesis; and smoothened signaling pathway. Predicted to localize to MKS complex; membrane; and microtubule organizing center. Human ortholog(s) of this gene implicated in Joubert syndrome 27 and Meckel syndrome. Orthologous to human B9D1 (B9 domain containing 1); INTERACTS WITH 1-naphthyl isothiocyanate; 4,4'-diaminodiphenylmethane; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B9 domain-containing protein 1; B9 protein domain 1; endothelial precursor cells protein B9; endothelial precursor protein B9; Eppb9; LOC287383; MGC189582
Orthologs:
Homo sapiens (human) : B9D1 (B9 domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : B9d1 (B9 protein domain 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : B9d1 (B9 domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : B9D1 (B9 domain containing 1)
Canis lupus familiaris (dog) : B9D1 (B9 domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : B9d1 (B9 domain containing 1)
Sus scrofa (pig) : B9D1 (B9 domain containing 1)
Chlorocebus sabaeus (African green monkey) : B9D1 (B9 domain containing 1)
Heterocephalus glaber (naked mole-rat) : B9d1 (B9 domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01047,784,294 - 47,794,399 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1047,785,033 - 47,792,590 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1049,020,454 - 49,028,069 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01048,805,094 - 48,813,406 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,665,630 - 47,673,227 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11047,679,244 - 47,686,849 (+)NCBI
Celera1045,438,340 - 45,445,937 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on B9d1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305522
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.