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Gene: Pagr1 (Paxip1-associated glutamate-rich protein 1) Rattus norvegicus
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Symbol: Pagr1
Name: Paxip1-associated glutamate-rich protein 1
Description: Predicted to have estrogen receptor binding activity. Predicted to be involved in several processes, including histone modification; positive regulation of nucleobase-containing compound metabolic process; and regulation of cell cycle phase transition. Predicted to localize to the MLL3/4 complex. Orthologous to human PAGR1 (PAXIP1 associated glutamate rich protein 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC293500; Pa1; PAXIP1-associated protein 1; PTIP-associated protein 1; RGD1305592; similar to RIKEN cDNA 2900092E17
Orthologs:
Homo sapiens (human) : PAGR1 (PAXIP1 associated glutamate rich protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Pagr1a (PAXIP1 associated glutamate rich protein 1A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pagr1 (PAXIP1 associated glutamate rich protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PAGR1 (PAXIP1 associated glutamate rich protein 1)
Canis lupus familiaris (dog) : PAGR1 (PAXIP1 associated glutamate rich protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pagr1 (PAXIP1 associated glutamate rich protein 1)
Sus scrofa (pig) : PAGR1 (PAXIP1 associated glutamate rich protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01198,448,790 - 198,451,078 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,449,040 - 198,450,688 (-)Ensembl
Rnor_5.01205,429,226 - 205,431,514 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,193,174 - 186,195,462 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11186,343,054 - 186,345,343 (-)NCBI
Celera1179,277,345 - 179,279,663 (-)NCBICelera
Cytogenetic Map1q37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pagr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305592
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.