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Gene: Samd4b (sterile alpha motif domain containing 4B) Rattus norvegicus
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Symbol: Samd4b
Name: sterile alpha motif domain containing 4B
Description: Predicted to have mRNA binding activity and translation repressor activity. Predicted to be involved in cerebellar neuron development and regulation of gene expression. Predicted to localize to the P-body and cytosol. Orthologous to human SAMD4B (sterile alpha motif domain containing 4B); INTERACTS WITH (+)-schisandrin B; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC308473; protein Smaug homolog 2; RGD1305597; similar to BC042901 protein
Orthologs:
Homo sapiens (human) : SAMD4B (sterile alpha motif domain containing 4B)  HGNC  Alliance
Mus musculus (house mouse) : Samd4b (sterile alpha motif domain containing 4B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Samd4b (sterile alpha motif domain containing 4B)
Pan paniscus (bonobo/pygmy chimpanzee) : SAMD4B (sterile alpha motif domain containing 4B)
Canis lupus familiaris (dog) : SAMD4B (sterile alpha motif domain containing 4B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Samd4b (sterile alpha motif domain containing 4B)
Sus scrofa (pig) : SAMD4B (sterile alpha motif domain containing 4B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0185,324,017 - 85,362,266 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl185,324,043 - 85,362,241 (+)Ensembl
Rnor_5.0186,543,900 - 86,577,571 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4183,506,971 - 83,531,789 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1183,585,834 - 83,609,901 (-)NCBI
Celera178,085,681 - 78,110,098 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Samd4b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305597
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.