Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ccdc30 (coiled-coil domain containing 30) Rattus norvegicus
Analyze
Symbol: Ccdc30
Name: coiled-coil domain containing 30
Description: Orthologous to human CCDC30 (coiled-coil domain containing 30); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: coiled-coil domain-containing protein 30; LOC362580; LOC500539; LOW QUALITY PROTEIN: coiled-coil domain-containing protein 30; RGD1305604; RGD1565923; similar to CG2919-PA; similar to hypothetical protein FLJ20972
Orthologs:
Homo sapiens (human) : CCDC30 (coiled-coil domain containing 30)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc30 (coiled-coil domain containing 30)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc30 (coiled-coil domain containing 30)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC30 (coiled-coil domain containing 30)
Canis lupus familiaris (dog) : CCDC30 (coiled-coil domain containing 30)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc30 (coiled-coil domain containing 30)
Sus scrofa (pig) : CCDC30 (coiled-coil domain containing 30)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05138,364,211 - 138,462,922 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05142,180,502 - 142,261,904 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45139,915,083 - 139,956,693 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15139,881,298 - 139,961,919 (+)NCBI
Celera5131,452,082 - 131,543,521 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc30
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305604
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.