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Gene: Otud4 (OTU deubiquitinase 4) Rattus norvegicus
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Symbol: Otud4
Name: OTU deubiquitinase 4
Description: Predicted to have Lys63-specific deubiquitinase activity; molecular adaptor activity; and thiol-dependent ubiquitin-specific protease activity. Predicted to be involved in several processes, including negative regulation of signal transduction; positive regulation of DNA demethylation; and protein deubiquitination. Predicted to localize to cytosol. Orthologous to human OTUD4 (OTU deubiquitinase 4); INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC307774; OTU domain containing 4; OTU domain-containing protein 4; RGD1305606; similar to mKIAA1046 protein
Orthologs:
Homo sapiens (human) : OTUD4 (OTU deubiquitinase 4)  HGNC  Alliance
Mus musculus (house mouse) : Otud4 (OTU domain containing 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Otud4 (OTU deubiquitinase 4)
Pan paniscus (bonobo/pygmy chimpanzee) : OTUD4 (OTU deubiquitinase 4)
Canis lupus familiaris (dog) : OTUD4 (OTU deubiquitinase 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Otud4 (OTU deubiquitinase 4)
Sus scrofa (pig) : OTUD4 (OTU deubiquitinase 4)
Chlorocebus sabaeus (African green monkey) : OTUD4 (OTU deubiquitinase 4)
Heterocephalus glaber (naked mole-rat) : Otud4 (OTU deubiquitinase 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01931,895,753 - 31,942,509 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1931,899,087 - 31,942,180 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01942,799,728 - 42,846,155 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41930,124,849 - 30,167,942 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11930,129,291 - 30,172,543 (-)NCBI
Celera1927,744,764 - 27,787,846 (-)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Otud4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305606
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.