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Gene: Taf11 (TATA-box binding protein associated factor 11) Rattus norvegicus
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Symbol: Taf11
Name: TATA-box binding protein associated factor 11
Description: Predicted to have several functions, including protein N-terminus binding activity; transcription coactivator activity; and transcription factor binding activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly and positive regulation by host of viral transcription. Predicted to localize to the Golgi apparatus and transcription factor TFIID complex. Orthologous to human TAF11 (TATA-box binding protein associated factor 11); PARTICIPATES IN RNA polymerase II transcription initiation pathway; INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; Soman.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC309638; MGC105516; TAF(II)28; TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor; TAFII-28; TAFII28; TATA box binding protein (TBP)-associated factor 11; TFIID subunit p30-beta; transcription initiation factor TFIID 28 kDa subunit; transcription initiation factor TFIID subunit 11
Orthologs:
Homo sapiens (human) : TAF11 (TATA-box binding protein associated factor 11)  HGNC  Alliance
Mus musculus (house mouse) : Taf11 (TATA-box binding protein associated factor 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Taf11 (TATA-box binding protein associated factor 11)
Pan paniscus (bonobo/pygmy chimpanzee) : TAF11 (TATA-box binding protein associated factor 11)
Canis lupus familiaris (dog) : TAF11 (TATA-box binding protein associated factor 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Taf11 (TATA-box binding protein associated factor 11)
Sus scrofa (pig) : TAF11 (TATA-box binding protein associated factor 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0207,476,648 - 7,484,417 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0209,678,686 - 9,686,472 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4206,113,417 - 6,119,513 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1206,113,643 - 6,119,740 (-)NCBI
Celera207,516,846 - 7,522,942 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Taf11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305626
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.