Gene: Ctdsp1 (CTD small phosphatase 1) Rattus norvegicus
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Symbol: Ctdsp1
Name: CTD small phosphatase 1
Description: Predicted to have RNA polymerase II CTD heptapeptide repeat phosphatase activity; predicted to be involved in several processes, including negative regulation of G1/S transition of mitotic cell cycle, negative regulation of neuron differentiation, and negative regulation of protein phosphorylation; predicted to localize to the nucleoplasm; orthologous to human CTDSP1 (CTD small phosphatase 1); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; RNA polymerase II transcription pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1; LOC363249
Orthologs:
Homo sapiens (human) : CTDSP1 (CTD small phosphatase 1)  HGNC  Alliance
Mus musculus (house mouse) : Ctdsp1 (CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ctdsp1 (CTD small phosphatase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CTDSP1 (CTD small phosphatase 1)
Canis lupus familiaris (dog) : CTDSP1 (CTD small phosphatase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ctdsp1 (CTD small phosphatase 1)
Sus scrofa (pig) : CTDSP1 (CTD small phosphatase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0981,672,613 - 81,677,979 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0981,437,162 - 81,442,528 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4973,731,542 - 73,736,764 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1973,878,323 - 73,884,036 (+)NCBI
Celera973,547,362 - 73,552,583 (+)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ctdsp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305629
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.