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Gene: Rrp1b (ribosomal RNA processing 1B) Rattus norvegicus
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Symbol: Rrp1b
Name: ribosomal RNA processing 1B
CRRD ID: 1305633
Description: Predicted to have transcription coactivator activity. Predicted to be involved in several processes, including negative regulation of hydrolase activity; positive regulation by host of viral transcription; and regulation of RNA metabolic process. Predicted to localize to chromatin; nuclear lumen; and preribosome, large subunit precursor. Orthologous to human RRP1B (ribosomal RNA processing 1B); INTERACTS WITH acrylamide; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC309673; RGD1305633; ribosomal RNA processing 1 homolog B; ribosomal RNA processing 1 homolog B (S. cerevisiae); ribosomal RNA processing protein 1 homolog B; similar to RIKEN cDNA 2600005C20
Orthologs:
Homo sapiens (human) : RRP1B (ribosomal RNA processing 1B)  HGNC  Alliance
Mus musculus (house mouse) : Rrp1b (ribosomal RNA processing 1B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rrp1b (ribosomal RNA processing 1B)
Pan paniscus (bonobo/pygmy chimpanzee) : RRP1B (ribosomal RNA processing 1B)
Canis lupus familiaris (dog) : RRP1B (ribosomal RNA processing 1B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rrp1b (ribosomal RNA processing 1B)
Sus scrofa (pig) : RRP1B (ribosomal RNA processing 1B)
Chlorocebus sabaeus (African green monkey) : RRP1B (ribosomal RNA processing 1B)
Heterocephalus glaber (naked mole-rat) : Rrp1b (ribosomal RNA processing 1B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02010,844,234 - 10,869,830 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2010,844,266 - 10,869,821 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02013,016,065 - 13,041,641 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42010,454,161 - 10,478,482 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12010,454,391 - 10,477,785 (+)NCBI
Celera2011,633,485 - 11,659,795 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rrp1b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305633
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.