Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Scyl2 (SCY1 like pseudokinase 2) Rattus norvegicus
Analyze
Symbol: Scyl2
Name: SCY1 like pseudokinase 2
Description: Predicted to have signaling receptor binding activity. Predicted to be involved in several processes, including endosome to lysosome transport; positive regulation of receptor-mediated endocytosis; and receptor internalization involved in canonical Wnt signaling pathway. Orthologous to human SCYL2 (SCY1 like pseudokinase 2); INTERACTS WITH bisphenol A; gentamycin; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical LOC314717; LOC314717; RGD1305665; SCY1-like 2; SCY1-like 2 (S. cerevisiae); SCY1-like protein 2; SCY1-like, kinase-like 2
Orthologs:
Homo sapiens (human) : SCYL2 (SCY1 like pseudokinase 2)  HGNC  Alliance
Mus musculus (house mouse) : Scyl2 (SCY1-like 2 (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scyl2 (SCY1 like pseudokinase 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SCYL2 (SCY1 like pseudokinase 2)
Canis lupus familiaris (dog) : SCYL2 (SCY1 like pseudokinase 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scyl2 (SCY1 like pseudokinase 2)
Sus scrofa (pig) : SCYL2 (SCY1 like pseudokinase 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0730,291,087 - 30,344,464 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl730,291,087 - 30,344,445 (-)Ensembl
Rnor_5.0730,387,991 - 30,441,350 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4726,429,923 - 26,483,533 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1726,451,520 - 26,503,820 (-)NCBI
Celera721,207,836 - 21,260,716 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scyl2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305665
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.