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Gene: Sarnp (SAP domain containing ribonucleoprotein) Rattus norvegicus
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Symbol: Sarnp
Name: SAP domain containing ribonucleoprotein
Description: Predicted to have several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RS domain binding activity; and nucleic acid binding activity. Predicted to be involved in mRNA export from nucleus. Predicted to localize to the cytoplasmic ribonucleoprotein granule; nuclear speck; and transcription export complex. Orthologous to human SARNP (SAP domain containing ribonucleoprotein); PARTICIPATES IN NXF1-NXT1 export pathway; INTERACTS WITH 3-chloropropane-1,2-diol; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Cip29; cytokine induced protein 29 kDa; LOC362819; MGC112623; nuclear protein Hcc-1; RGD1305692; SAP domain-containing ribonucleoprotein; similar to RIKEN cDNA 1110005A23
Orthologs:
Homo sapiens (human) : SARNP (SAP domain containing ribonucleoprotein)  HGNC  Alliance
Mus musculus (house mouse) : Gm6563 (predicted pseudogene 6563)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Sarnp (SAP domain containing ribonucleoprotein)
Pan paniscus (bonobo/pygmy chimpanzee) : SARNP (SAP domain containing ribonucleoprotein)
Canis lupus familiaris (dog) : SARNP (SAP domain containing ribonucleoprotein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sarnp (SAP domain containing ribonucleoprotein)
Sus scrofa (pig) : SARNP (SAP domain containing ribonucleoprotein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.073,246,220 - 3,300,467 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.073,217,778 - 3,271,845 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.472,121,254 - 2,176,071 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.172,121,394 - 2,176,059 (+)NCBI
Celera71,121,855 - 1,176,089 (+)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sarnp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305692
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.