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Gene: Tmem38b (transmembrane protein 38B) Rattus norvegicus
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Symbol: Tmem38b
Name: transmembrane protein 38B
Description: Predicted to have potassium channel activity. Predicted to be involved in several processes, including cellular response to caffeine; lung development; and regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion. Predicted to localize to the endoplasmic reticulum. Human ortholog(s) of this gene implicated in osteogenesis imperfecta type 14. Orthologous to human TMEM38B (transmembrane protein 38B); INTERACTS WITH 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362521; RGD1305703; similar to hypothetical protein D4Ertd89e; TRIC-B; TRICB; trimeric intracellular cation channel type B
Orthologs:
Homo sapiens (human) : TMEM38B (transmembrane protein 38B)  HGNC  Alliance
Mus musculus (house mouse) : Tmem38b (transmembrane protein 38B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem38b (transmembrane protein 38B)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM38B (transmembrane protein 38B)
Canis lupus familiaris (dog) : TMEM38B (transmembrane protein 38B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem38b (transmembrane protein 38B)
Sus scrofa (pig) : TMEM38B (transmembrane protein 38B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0570,639,156 - 70,675,055 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0574,816,786 - 74,852,685 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4571,275,819 - 71,311,539 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1571,280,931 - 71,316,651 (+)NCBI
Celera567,353,639 - 67,389,331 (+)NCBICelera
Cytogenetic Map5q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmem38b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305703
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.