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Gene: H1f1 (H1.1 linker histone, cluster member) Rattus norvegicus
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Symbol: H1f1
Name: H1.1 linker histone, cluster member
Description: Predicted to have double-stranded DNA binding activity; heparin binding activity; and nucleosomal DNA binding activity. Predicted to be involved in several processes, including DNA packaging; positive regulation of receptor-mediated endocytosis; and regulation of nucleobase-containing compound metabolic process. Predicted to localize to the cell surface; nuclear euchromatin; and vesicle. Orthologous to human H1-1 (H1.1 linker histone, cluster member); INTERACTS WITH (-)-epigallocatechin 3-gallate (ortholog); benzo[a]pyrene (ortholog); Benzo[ghi]perylene (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Hist1h1a; histone 1, H1a; histone cluster 1 H1 family member a; histone cluster 1, H1a; histone H1.1; histone H1a; LOC291145
Orthologs:
Homo sapiens (human) : H1-1 (H1.1 linker histone, cluster member)  HGNC  Alliance
Mus musculus (house mouse) : H1f1 (H1.1 linker histone, cluster member)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : H1-1 (H1.1 linker histone, cluster member)
Pan paniscus (bonobo/pygmy chimpanzee) : H1-1 (H1.1 linker histone, cluster member)
Canis lupus familiaris (dog) : H1-1 (H1.1 linker histone, cluster member)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : H1-1 (H1.1 linker histone, cluster member)
Sus scrofa (pig) : H1-1 (H1.1 linker histone, cluster member)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01743,614,101 - 43,614,844 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01745,468,486 - 45,469,229 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41748,526,427 - 48,527,170 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11748,529,313 - 48,530,006 (+)NCBI
Celera1740,997,741 - 40,998,484 (-)NCBICelera
Cytogenetic Map17p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on H1f1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305706
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-09-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.