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Gene: Phf12 (PHD finger protein 12) Rattus norvegicus
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Symbol: Phf12
Name: PHD finger protein 12
Description: Predicted to have phosphatidylinositol binding activity; transcription corepressor activity; and transcription corepressor binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to localize to the Sin3 complex and transcriptional repressor complex. Orthologous to human PHF12 (PHD finger protein 12); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC303274; MGC109651
Orthologs:
Homo sapiens (human) : PHF12 (PHD finger protein 12)  HGNC  Alliance
Mus musculus (house mouse) : Phf12 (PHD finger protein 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phf12 (PHD finger protein 12)
Pan paniscus (bonobo/pygmy chimpanzee) : PHF12 (PHD finger protein 12)
Canis lupus familiaris (dog) : PHF12 (PHD finger protein 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phf12 (PHD finger protein 12)
Sus scrofa (pig) : PHF12 (PHD finger protein 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01064,815,462 - 64,863,514 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01066,762,563 - 66,810,441 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41064,024,531 - 64,074,458 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11064,038,176 - 64,088,085 (+)NCBI
Celera1061,850,571 - 61,897,329 (+)NCBICelera
Cytogenetic Map10q24-q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Phf12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305731
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.