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Gene: Cpsf3 (cleavage and polyadenylation specific factor 3) Rattus norvegicus
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Symbol: Cpsf3
Name: cleavage and polyadenylation specific factor 3
Description: Predicted to have 5'-3' exonuclease activity; RNA binding activity; and endoribonuclease activity. Predicted to be involved in mRNA 3'-end processing by stem-loop binding activity and cleavage and mRNA polyadenylation. Predicted to localize to mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human CPSF3 (cleavage and polyadenylation specific factor 3); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; INTERACTS WITH 2,4-dinitrotoluene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cleavage and polyadenylation specific factor 3, 73kDa; cleavage and polyadenylation specificity factor 3; cleavage and polyadenylation specificity factor subunit 3; LOC298916; MGC124885
Orthologs:
Homo sapiens (human) : CPSF3 (cleavage and polyadenylation specific factor 3)  HGNC  Alliance
Mus musculus (house mouse) : Cpsf3 (cleavage and polyadenylation specificity factor 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cpsf3 (cleavage and polyadenylation specific factor 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CPSF3 (cleavage and polyadenylation specific factor 3)
Canis lupus familiaris (dog) : CPSF3 (cleavage and polyadenylation specific factor 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cpsf3 (cleavage and polyadenylation specific factor 3)
Sus scrofa (pig) : CPSF3 (cleavage and polyadenylation specific factor 3)
Chlorocebus sabaeus (African green monkey) : CPSF3 (cleavage and polyadenylation specific factor 3)
Heterocephalus glaber (naked mole-rat) : Cpsf3 (cleavage and polyadenylation specific factor 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0643,363,792 - 43,391,712 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl643,363,792 - 43,391,712 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0660,231,498 - 60,259,421 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,844,971 - 41,873,619 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1641,848,090 - 41,876,746 (+)NCBI
Celera640,123,274 - 40,151,191 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cpsf3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305767
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.