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Gene: Atmin (ATM interactor) Rattus norvegicus
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Symbol: Atmin
Name: ATM interactor
Description: Predicted to have dynein complex binding activity and transcription regulatory region DNA binding activity. Predicted to be involved in motile cilium assembly; positive regulation of non-motile cilium assembly; and positive regulation of transcription, DNA-templated. Predicted to localize to the nuclear body. Orthologous to human ATMIN (ATM interactor); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cobalt dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Asciz; ATM/ATR-Substrate Chk2-Interacting Zn2+-finger protein; LOC315037; RGD1305781; similar to mKIAA0431 protein
Orthologs:
Homo sapiens (human) : ATMIN (ATM interactor)  HGNC  Alliance
Mus musculus (house mouse) : Atmin (ATM interactor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atmin (ATM interactor)
Pan paniscus (bonobo/pygmy chimpanzee) : ATMIN (ATM interactor)
Canis lupus familiaris (dog) : ATMIN (ATM interactor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atmin (ATM interactor)
Sus scrofa (pig) : ATMIN (ATM interactor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01949,482,482 - 49,499,682 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01960,273,787 - 60,290,987 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41947,054,050 - 47,071,395 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1771,090,419 - 71,092,881 (-)NCBI
Celera1944,269,716 - 44,286,805 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atmin
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305781
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.