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Gene: Atr (ATR serine/threonine kinase) Rattus norvegicus
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Symbol: Atr
Name: ATR serine/threonine kinase
Description: Predicted to have MutLalpha complex binding activity; MutSalpha complex binding activity; and protein serine/threonine kinase activity. Involved in response to drug. Predicted to localize to the Golgi apparatus; PML body; and XY body. Human ortholog(s) of this gene implicated in Seckel syndrome 1 and pancreatic cancer. Orthologous to human ATR (ATR serine/threonine kinase); INTERACTS WITH amphetamine; bisphenol A; cisplatin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: ataxia telangiectasia and Rad3 related; ataxia telangiectasia and rad3 related-like; LOC300942; LOC685055; serine/threonine-protein kinase ATR; similar to Serine/threonine-protein kinase ATR (Ataxia telangiectasia and Rad3-related protein)
Orthologs:
Homo sapiens (human) : ATR (ATR serine/threonine kinase)  HGNC  Alliance
Mus musculus (house mouse) : Atr (ataxia telangiectasia and Rad3 related)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atr (ATR serine/threonine kinase)
Pan paniscus (bonobo/pygmy chimpanzee) : ATR (ATR serine/threonine kinase)
Canis lupus familiaris (dog) : ATR (ATR serine/threonine kinase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atr (ATR serine/threonine kinase)
Sus scrofa (pig) : ATR (ATR serine/threonine kinase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08103,673,578 - 103,770,886 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8103,673,411 - 103,770,947 (+)Ensembl
Rnor_5.08103,123,798 - 103,222,597 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48100,936,342 - 101,014,881 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18101,002,130 - 101,034,333 (+)NCBI
Celera895,873,052 - 95,969,777 (+)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atr
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305796
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.