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Gene: Prpf31 (pre-mRNA processing factor 31) Rattus norvegicus
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Symbol: Prpf31
Name: pre-mRNA processing factor 31
Description: Predicted to have U4 snRNA binding activity; U4atac snRNA binding activity; and snRNP binding activity. Predicted to be involved in ribonucleoprotein complex localization and spliceosomal tri-snRNP complex assembly. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in retinitis pigmentosa 11. Orthologous to human PRPF31 (pre-mRNA processing factor 31); PARTICIPATES IN retinitis pigmentosa pathway; spliceosome pathway; INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; vinclozolin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC292536; PRP31 pre-mRNA processing factor 31 homolog; PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae); PRP31 pre-mRNA processing factor 31 homolog (yeast); U4/U6 small nuclear ribonucleoprotein Prp31
Orthologs:
Homo sapiens (human) : PRPF31 (pre-mRNA processing factor 31)  HGNC  Alliance
Mus musculus (house mouse) : Prpf31 (pre-mRNA processing factor 31)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prpf31 (pre-mRNA processing factor 31)
Pan paniscus (bonobo/pygmy chimpanzee) : PRPF31 (pre-mRNA processing factor 31)
Canis lupus familiaris (dog) : PRPF31 (pre-mRNA processing factor 31)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prpf31 (pre-mRNA processing factor 31)
Sus scrofa (pig) : PRPF31 (pre-mRNA processing factor 31)
Chlorocebus sabaeus (African green monkey) : PRPF31 (pre-mRNA processing factor 31)
Heterocephalus glaber (naked mole-rat) : Prpf31 (pre-mRNA processing factor 31)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0164,150,786 - 64,162,461 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl164,150,786 - 64,162,461 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0163,143,068 - 63,154,743 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4163,888,815 - 63,900,490 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1163,966,376 - 63,976,668 (-)NCBI
Celera163,300,810 - 63,312,485 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prpf31
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305832
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.