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Gene: Pcdh18 (protocadherin 18) Rattus norvegicus
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Symbol: Pcdh18
Name: protocadherin 18
Description: Predicted to have calcium ion binding activity. Predicted to be involved in brain development and cell adhesion. Predicted to localize to the integral component of plasma membrane. Orthologous to human PCDH18 (protocadherin 18); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC295027; MGC188762; protocadherin-18
Orthologs:
Homo sapiens (human) : PCDH18 (protocadherin 18)  HGNC  Alliance
Mus musculus (house mouse) : Pcdh18 (protocadherin 18)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcdh18 (protocadherin 18)
Pan paniscus (bonobo/pygmy chimpanzee) : PCDH18 (protocadherin 18)
Canis lupus familiaris (dog) : PCDH18 (protocadherin 18)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcdh18 (protocadherin 18)
Sus scrofa (pig) : PCDH18 (protocadherin 18)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02138,819,957 - 138,833,932 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2138,819,960 - 138,833,933 (-)Ensembl
Rnor_5.02158,301,727 - 158,315,708 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42138,615,496 - 138,629,181 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12138,565,226 - 138,579,122 (-)NCBI
Celera2128,336,949 - 128,350,631 (-)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pcdh18
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305870
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.