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Gene: Tcfl5 (transcription factor like 5) Rattus norvegicus
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Symbol: Tcfl5
Name: transcription factor like 5
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in several processes, including negative regulation of transcription by RNA polymerase II; regulation of cell population proliferation; and spermatogenesis. Predicted to localize to the male germ cell nucleus. Orthologous to human TCFL5 (transcription factor like 5); INTERACTS WITH bisphenol A; furan; thioacetamide.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC311715; RGD1305899; similar to Protein C20orf158; transcription factor-like 5 (basic helix-loop-helix)
Orthologs:
Homo sapiens (human) : TCFL5 (transcription factor like 5)  HGNC  Alliance
Mus musculus (house mouse) : Tcfl5 (transcription factor-like 5 (basic helix-loop-helix))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcfl5 (transcription factor like 5)
Pan paniscus (bonobo/pygmy chimpanzee) : TCFL5 (transcription factor like 5)
Canis lupus familiaris (dog) : TCFL5 (transcription factor like 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcfl5 (transcription factor like 5)
Sus scrofa (pig) : TCFL5 (transcription factor like 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03176,124,846 - 176,144,531 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03179,825,531 - 179,851,570 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,712,264 - 169,731,865 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13169,618,303 - 169,637,880 (-)NCBI
Celera3164,821,793 - 164,848,082 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tcfl5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305899
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.