Gene: Chmp5 (charged multivesicular body protein 5) Rattus norvegicus
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Symbol: Chmp5
Name: charged multivesicular body protein 5
Description: Predicted to be involved in several processes, including cellular response to lipopolysaccharide, cellular response to muramyl dipeptide, and regulation of cell cycle process; predicted to localize to the cytosol and nucleus; orthologous to human CHMP5 (charged multivesicular body protein 5); PARTICIPATES IN endocytosis pathway; INTERACTS WITH (RS)-amphetamine; acrylamide; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chromatin modifying protein 5; chromatin-modifying protein 5; LOC297995; RGD1305968; similar to RIKEN cDNA 2210412K09
Orthologs:
Homo sapiens (human) : CHMP5 (charged multivesicular body protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Chmp5 (charged multivesicular body protein 5)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : CHMP5 (charged multivesicular body protein 5)
Canis lupus familiaris (dog) : CHMP5 (charged multivesicular body protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chmp5 (charged multivesicular body protein 5)
Sus scrofa (pig) : CHMP5 (charged multivesicular body protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0557,267,312 - 57,284,455 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0561,798,642 - 61,815,785 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4558,342,606 - 58,359,749 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1558,342,784 - 58,359,926 (+)NCBI
Celera554,693,232 - 54,710,375 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Chmp5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1305968
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.