Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tdrd1 (tudor domain containing 1) Rattus norvegicus
Analyze
Symbol: Tdrd1
Name: tudor domain containing 1
Description: Predicted to have metal ion binding activity. Predicted to be involved in gamete generation; gene silencing by RNA; and piRNA metabolic process. Predicted to localize to the chromatoid body and pi-body. Orthologous to human TDRD1 (tudor domain containing 1); INTERACTS WITH 1,3-dinitrobenzene; bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC292129; tudor domain-containing protein 1
Orthologs:
Homo sapiens (human) : TDRD1 (tudor domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Tdrd1 (tudor domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tdrd1 (tudor domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TDRD1 (tudor domain containing 1)
Canis lupus familiaris (dog) : TDRD1 (tudor domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tdrd1 (tudor domain containing 1)
Sus scrofa (pig) : TDRD1 (tudor domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01277,639,670 - 277,685,236 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01285,017,706 - 285,065,180 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41263,130,977 - 263,174,231 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11263,338,108 - 263,381,999 (+)NCBI
Celera1251,573,124 - 251,616,231 (+)NCBICelera
Cytogenetic Map1q55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tdrd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306140
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.