Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atp6v0d1 (ATPase H+ transporting V0 subunit D1) Rattus norvegicus
Analyze
Symbol: Atp6v0d1
Name: ATPase H+ transporting V0 subunit D1
Description: Predicted to have proton-exporting ATPase activity, phosphorylative mechanism and proton-transporting ATPase activity, rotational mechanism. Involved in brain development. Localizes to several cellular components, including apical plasma membrane; axon terminus; and synaptic vesicle. Predicted to colocalize with centrosome. Orthologous to human ATP6V0D1 (ATPase H+ transporting V0 subunit d1); PARTICIPATES IN oxidative phosphorylation pathway; phagocytosis pathway; rheumatoid arthritis pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Ac39; ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1; ATPase, H+ transporting, lysosomal V0 subunit D1; ATPase, H+ transporting, V0 subunit D; ATPase, H+ transporting, V0 subunit D isoform 1; LOC291969; physophilin; V-type proton ATPase subunit d 1
Orthologs:
Homo sapiens (human) : ATP6V0D1 (ATPase H+ transporting V0 subunit d1)  HGNC  Alliance
Mus musculus (house mouse) : Atp6v0d1 (ATPase, H+ transporting, lysosomal V0 subunit D1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp6v0d1 (ATPase H+ transporting V0 subunit d1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP6V0D1 (ATPase H+ transporting V0 subunit d1)
Canis lupus familiaris (dog) : ATP6V0D1 (ATPase H+ transporting V0 subunit d1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp6v0d1 (ATPase H+ transporting V0 subunit d1)
Sus scrofa (pig) : ATP6V0D1 (ATPase H+ transporting V0 subunit d1)
Chlorocebus sabaeus (African green monkey) : ATP6V0D1 (ATPase H+ transporting V0 subunit d1)
Heterocephalus glaber (naked mole-rat) : Atp6v0d1 (ATPase H+ transporting V0 subunit d1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01937,481,782 - 37,525,762 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1937,481,782 - 37,525,762 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01948,347,540 - 48,391,661 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41935,342,041 - 35,386,025 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11935,346,923 - 35,390,906 (-)NCBI
Celera1932,831,706 - 32,875,649 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp6v0d1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306159
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.