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Gene: Snrpd1 (small nuclear ribonucleoprotein D1 polypeptide) Rattus norvegicus
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Symbol: Snrpd1
Name: small nuclear ribonucleoprotein D1 polypeptide
Description: Exhibits U1 snRNP binding activity. Predicted to be involved in spliceosomal snRNP assembly. Localizes to the U1 snRNP. Used to study nephritis; proteinuria; and systemic lupus erythematosus. Human ortholog(s) of this gene implicated in connective tissue disease; nephritis; proteinuria; and systemic lupus erythematosus. Orthologous to human SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide); PARTICIPATES IN spliceosome pathway; systemic lupus erythematosus pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC291794; small nuclear ribonucleoprotein D1; small nuclear ribonucleoprotein Sm D1
Orthologs:
Homo sapiens (human) : SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide)  HGNC  Alliance
Mus musculus (house mouse) : Snrpd1 (small nuclear ribonucleoprotein D1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snrpd1 (small nuclear ribonucleoprotein D1 polypeptide)
Pan paniscus (bonobo/pygmy chimpanzee) : SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide)
Canis lupus familiaris (dog) : SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snrpd1 (small nuclear ribonucleoprotein D1 polypeptide)
Sus scrofa (pig) : SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide)
Chlorocebus sabaeus (green monkey) : SNRPD1 (small nuclear ribonucleoprotein D1 polypeptide)
Heterocephalus glaber (naked mole-rat) : Snrpd1 (small nuclear ribonucleoprotein D1 polypeptide)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0181,866,066 - 1,876,613 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl181,866,080 - 1,876,613 (+)Ensembl
Rnor_5.0181,898,841 - 1,909,374 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,001,140 - 2,011,674 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1182,001,148 - 2,011,601 (+)NCBI
Celera181,578,553 - 1,589,086 (+)NCBICelera
Cytogenetic Map18p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snrpd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306345
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.