Gene: Nipbl (NIPBL, cohesin loading factor) Rattus norvegicus
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Symbol: Nipbl
Name: NIPBL, cohesin loading factor
Description: Predicted to have several functions, including chromatin binding activity, chromo shadow domain binding activity, and histone deacetylase binding activity; predicted to be involved in several processes, including animal organ development, positive regulation of cellular metabolic process, and sister chromatid segregation; predicted to localize to the Scc2-Scc4 cohesin loading complex, chromatin, and integrator complex; orthologous to human NIPBL (NIPBL cohesin loading factor); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; acrylamide; atrazine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: delangin; IDN3; Nipped-B homolog; Nipped-B homolog (Drosophila); nipped-B-like protein
Orthologs:
Homo sapiens (human) : NIPBL (NIPBL cohesin loading factor)  HGNC  Alliance
Mus musculus (house mouse) : Nipbl (NIPBL cohesin loading factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nipbl (NIPBL cohesin loading factor)
Pan paniscus (bonobo/pygmy chimpanzee) : NIPBL (NIPBL cohesin loading factor)
Canis lupus familiaris (dog) : NIPBL (NIPBL cohesin loading factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nipbl (NIPBL cohesin loading factor)
Sus scrofa (pig) : NIPBL (NIPBL cohesin loading factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0257,508,830 - 57,676,197 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0278,992,721 - 79,160,884 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4257,908,828 - 58,099,422 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1257,837,538 - 58,006,254 (-)NCBI
Celera253,014,297 - 53,179,686 (-)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nipbl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306393
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.