Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Rhbdd1 (rhomboid domain containing 1) Rattus norvegicus
Analyze
Symbol: Rhbdd1
Name: rhomboid domain containing 1
Description: Predicted to have serine-type endopeptidase activity. Predicted to be involved in several processes, including cellular response to unfolded protein; membrane protein proteolysis; and positive regulation of protein metabolic process. Predicted to localize to the endoplasmic reticulum quality control compartment and integral component of endoplasmic reticulum membrane. Orthologous to human RHBDD1 (rhomboid domain containing 1); INTERACTS WITH (+)-schisandrin B; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical LOC316557; LOC316557; MGC114461; RGD1306477; rhomboid domain-containing protein 1; rhomboid-like protein 4; rhomboid-related protein 4; rRHBDD1; RRP4
Orthologs:
Homo sapiens (human) : RHBDD1 (rhomboid domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Rhbdd1 (rhomboid domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rhbdd1 (rhomboid domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RHBDD1 (rhomboid domain containing 1)
Canis lupus familiaris (dog) : RHBDD1 (rhomboid domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rhbdd1 (rhomboid domain containing 1)
Sus scrofa (pig) : RHBDD1 (rhomboid domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0988,110,731 - 88,229,462 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0987,859,493 - 87,978,041 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4981,685,464 - 81,778,714 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1981,868,882 - 81,962,132 (+)NCBI
Celera981,097,666 - 81,190,159 (+)NCBICelera
Cytogenetic Map9q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rhbdd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306477
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.