Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Zbtb39 (zinc finger and BTB domain containing 39) Rattus norvegicus
Analyze
Symbol: Zbtb39
Name: zinc finger and BTB domain containing 39
Description: Predicted to have nucleic acid binding activity. Orthologous to human ZBTB39 (zinc finger and BTB domain containing 39); INTERACTS WITH (RS)-amphetamine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC299510; RGD1306532; similar to Hypothetical zinc finger protein KIAA0352; zinc finger and BTB domain-containing protein 39
Orthologs:
Homo sapiens (human) : ZBTB39 (zinc finger and BTB domain containing 39)  HGNC  Alliance
Mus musculus (house mouse) : Zbtb39 (zinc finger and BTB domain containing 39)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zbtb39 (zinc finger and BTB domain containing 39)
Pan paniscus (bonobo/pygmy chimpanzee) : ZBTB39 (zinc finger and BTB domain containing 39)
Canis lupus familiaris (dog) : ZBTB39 (zinc finger and BTB domain containing 39)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zbtb39 (zinc finger and BTB domain containing 39)
Sus scrofa (pig) : ZBTB39 (zinc finger and BTB domain containing 39)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0771,036,581 - 71,044,057 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0771,209,250 - 71,216,726 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,731,533 - 67,739,030 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1767,753,981 - 67,756,162 (+)NCBI
Celera760,716,015 - 60,723,569 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Zbtb39
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306532
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.