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Gene: Sgcd (sarcoglycan, delta) Rattus norvegicus
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Symbol: Sgcd
Name: sarcoglycan, delta
Description: Predicted to be involved in several processes, including cardiac muscle cell contraction; cell death; and heart development. Predicted to localize to the sarcoglycan complex; sarcolemma; and sarcoplasmic reticulum. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2F; dilated cardiomyopathy 1L; and muscular dystrophy. Orthologous to human SGCD (sarcoglycan delta); PARTICIPATES IN arrhythmogenic right ventricular cardiomyopathy pathway; dilated cardiomyopathy pathway; hypertrophic cardiomyopathy pathway; INTERACTS WITH acrylamide; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: delta-sarcoglycan; LOC360517; LOC497892; sarcoglycan, delta (dystrophin-associated glycoprotein); similar to Delta-sarcoglycan (SG-delta) (35 kDa dystrophin-associated glycoprotein) (35DAG)
Orthologs:
Homo sapiens (human) : SGCD (sarcoglycan delta)  HGNC  Alliance
Mus musculus (house mouse) : Sgcd (sarcoglycan, delta (dystrophin-associated glycoprotein))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sgcd (sarcoglycan delta)
Pan paniscus (bonobo/pygmy chimpanzee) : SGCD (sarcoglycan delta)
Canis lupus familiaris (dog) : SGCD (sarcoglycan delta)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sgcd (sarcoglycan delta)
Sus scrofa (pig) : SGCD (sarcoglycan delta)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01032,062,946 - 32,471,454 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01031,878,904 - 32,285,036 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41032,084,678 - 32,489,330 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1030,793,915 - 31,190,298 (-)NCBICelera
Cytogenetic Map10q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sgcd
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306638
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.