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Gene: Use1 (unconventional SNARE in the ER 1) Rattus norvegicus
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Symbol: Use1
Name: unconventional SNARE in the ER 1
CRRD ID: 1306660
Description: Predicted to have SNAP receptor activity. Predicted to be involved in endoplasmic reticulum tubular network organization; regulation of ER to Golgi vesicle-mediated transport; and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Localizes to several cellular components, including COPI-coated vesicle; Golgi apparatus; and SNARE complex. Orthologous to human USE1 (unconventional SNARE in the ER 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical LOC499392; LOC290627; RGD1306660; similar to RIKEN cDNA 2010315L10; unconventional SNARE in the ER 1 homolog; unconventional SNARE in the ER 1 homolog (S. cerevisiae); vesicle transport protein USE1
Orthologs:
Homo sapiens (human) : USE1 (unconventional SNARE in the ER 1)  HGNC  Alliance
Mus musculus (house mouse) : Use1 (unconventional SNARE in the ER 1 homolog (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Use1 (unconventional SNARE in the ER 1)
Pan paniscus (bonobo/pygmy chimpanzee) : USE1 (unconventional SNARE in the ER 1)
Canis lupus familiaris (dog) : USE1 (unconventional SNARE in the ER 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Use1 (unconventional SNARE in the ER 1)
Sus scrofa (pig) : USE1 (unconventional SNARE in the ER 1)
Chlorocebus sabaeus (African green monkey) : USE1 (unconventional SNARE in the ER 1)
Heterocephalus glaber (naked mole-rat) : Use1 (unconventional SNARE in the ER 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01619,762,202 - 19,765,781 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1619,762,938 - 19,765,782 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01619,622,280 - 19,625,903 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,528,286 - 18,530,994 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11618,528,291 - 18,530,992 (+)NCBI
Celera1618,246,778 - 18,249,398 (+)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Use1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306660
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.