Gene: Smc4 (structural maintenance of chromosomes 4) Rattus norvegicus
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Symbol: Smc4
Name: structural maintenance of chromosomes 4
Description: Predicted to have protein heterodimerization activity and single-stranded DNA binding activity; predicted to be involved in chromosome condensation, kinetochore organization, and nuclear division; predicted to localize to the condensin complex, cytosol, and nuclear speck; orthologous to human SMC4 (structural maintenance of chromosomes 4); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; aflatoxin B1; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC295107; MGC125078; SMC4 structural maintenance of chromosomes 4-like 1; SMC4 structural maintenance of chromosomes 4-like 1 (yeast); Smc4l1; structural maintenance of chromosomes protein 4
Orthologs:
Homo sapiens (human) : SMC4 (structural maintenance of chromosomes 4)  HGNC  Alliance
Mus musculus (house mouse) : Smc4 (structural maintenance of chromosomes 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smc4 (structural maintenance of chromosomes 4)
Pan paniscus (bonobo/pygmy chimpanzee) : SMC4 (structural maintenance of chromosomes 4)
Canis lupus familiaris (dog) : SMC4 (structural maintenance of chromosomes 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smc4 (structural maintenance of chromosomes 4)
Sus scrofa (pig) : SMC4 (structural maintenance of chromosomes 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02165,600,934 - 165,629,415 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02184,962,125 - 184,990,525 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42158,987,318 - 159,015,705 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12158,937,475 - 158,965,632 (+)NCBI
Celera2147,591,084 - 147,619,494 (+)NCBICelera
Cytogenetic Map2q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smc4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306680
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.