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Gene: Smoc2 (SPARC related modular calcium binding 2) Rattus norvegicus
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Symbol: Smoc2
Name: SPARC related modular calcium binding 2
Description: Predicted to have calcium ion binding activity and heparin binding activity. Predicted to be involved in several processes, including extracellular matrix organization; positive regulation of signal transduction; and positive regulation of vascular wound healing. Predicted to localize to several cellular components, including the basement membrane; extracellular space; and interstitial matrix. Orthologous to human SMOC2 (SPARC related modular calcium binding 2); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC292401; SPARC-related modular calcium-binding protein 2
Orthologs:
Homo sapiens (human) : SMOC2 (SPARC related modular calcium binding 2)  HGNC  Alliance
Mus musculus (house mouse) : Smoc2 (SPARC related modular calcium binding 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smoc2 (SPARC related modular calcium binding 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SMOC2 (SPARC related modular calcium binding 2)
Canis lupus familiaris (dog) : SMOC2 (SPARC related modular calcium binding 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smoc2 (SPARC related modular calcium binding 2)
Sus scrofa (pig) : SMOC2 (SPARC related modular calcium binding 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0156,242,289 - 56,374,106 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0157,434,118 - 57,565,436 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4153,165,792 - 53,295,145 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1153,168,675 - 53,298,175 (+)NCBI
Celera151,480,576 - 51,609,313 (+)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smoc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306681
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.