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Gene: Cfap53 (cilia and flagella associated protein 53) Rattus norvegicus
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Symbol: Cfap53
Name: cilia and flagella associated protein 53
CRRD ID: 1306734
Description: Predicted to be involved in determination of left/right symmetry. Human ortholog(s) of this gene implicated in visceral heterotaxy. Orthologous to human CFAP53 (cilia and flagella associated protein 53); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Ccdc11; cilia- and flagella-associated protein 53; coiled-coil domain containing 11; LOC364899; RGD1306734; similar to hypothetical protein FLJ32743
Orthologs:
Homo sapiens (human) : CFAP53 (cilia and flagella associated protein 53)  HGNC  Alliance
Mus musculus (house mouse) : Cfap53 (cilia and flagella associated protein 53)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cfap53 (cilia and flagella associated protein 53)
Pan paniscus (bonobo/pygmy chimpanzee) : CFAP53 (cilia and flagella associated protein 53)
Canis lupus familiaris (dog) : CFAP53 (cilia and flagella associated protein 53)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cfap53 (cilia and flagella associated protein 53)
Sus scrofa (pig) : CFAP53 (cilia and flagella associated protein 53)
Chlorocebus sabaeus (African green monkey) : CFAP53 (cilia and flagella associated protein 53)
Heterocephalus glaber (naked mole-rat) : Cfap53 (cilia and flagella associated protein 53)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01870,263,290 - 70,330,420 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1870,263,359 - 70,329,907 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01869,404,834 - 69,472,256 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41871,083,103 - 71,151,732 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11871,156,303 - 71,224,840 (+)NCBI
Celera1866,062,639 - 66,130,812 (+)NCBICelera
Cytogenetic Map18q12.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cfap53
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306734
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.